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Bayesian Analysis of Variance for Microarrays

BAMarray 3.0 downloads

We are in the process of developing a universal BAMarray executable for additional platforms. Please stay tuned. We expect this package to be posted in mid 2010. Thank you.
Mac OS X and Linux
  1. We support Mac OS X 10.4, 10.5, 10.6 and Linux.
  2. Download the appropriate binary of BAMarray for your Java Virtual Machine (JVM). You can determine whether your JVM is 32-bit or 64-bit by typing

    java -version

    The output will contain the string "64-Bit" if your JVM is 64-bit. If your JVM is 32-bit, it will not comment on its bitness

    Using a 64-bit JVM will give you access to memory above the 4.3 GB barrier, thus allowing you to analyze larger data sets
  3. Download the appropriate zip file to a directory of your choice, e.g. $BAM_HOME
  4. Unzip the package: navigate to the directory where you downloaded the package and double click on it
  5. Run the application: open a terminal (if you have not already done so above), go to $BAM_HOME/BAMarray, and type

    ./bam.sh

    You may have to give permission to bam.sh

    chmod aou+x bam.sh

    Mac OS X PowerPC (32-bit)
    Mac OS X Intel     (32-bit)
    Mac OS X Intel (64-bit)

    Linux (32-bit)
    Linux (64-bit)